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MAJORMethodology Course Descriptions Designing the Concentration/ Breadth Areas Concentration/Breadth Area Approved Lists:
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Bioinformatics Concentration
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| PIC 10B | Intermediate Programming | (W,Sp ) |
| PIC 10C | Advanced Programming | (Sp) |
| PIC 60 | Data Structures and Algorithms | (W) |
| OR | ||
| the following 2 premajor Computer Science (CS) courses (8 units) (in addition to PIC 10A or CS 31 required in the premajor): | ||
| CS32 | Introduction to Computer Science II | (F,W,Sp) |
| CS 180 | Introduction to Algorithms and Complexity | (F,W,Sp) |
II. Six additional courses selected from the following 3 groups. At least one course from each Group A, B and C must be included, and the entire 6 must form a coherent set, as justified in the student's narrative submitted when applying to the Major. These courses must be chosen in consultation with a faculty mentor and approved by the Program Chair.
(A) BI Methodology
| Math 113 | Combinatorics | |
| Math 134 | Linear and Nonlinear Systems of Differential Equations | |
| Math 142 | Mathematical Modeling | |
| EE 103 or Math 151A | Applied Numerical Methods | |
| Math 151B | Applied Numerical Methods | |
| Math 170B | Probability Theory | |
| EE 131B or Math 171 | Stochastic Processes | |
| Math 191 | Bioinfor-math-ics | |
| EE 142 | Linear Systems | |
| Stats M254/Biomath M271 | Statistical Methods in Computational Biology | |
| Statistics 165 | Statistical Methods and Data Mining in Microarray Analysis | |
| Statistics C180 | Introduction to Bayesian Statistics | |
| Biomath 106 | Introduction to Cellular Modeling | |
| Biomath 108 | Introduction to Modeling in Neurobiology | |
| Human Genetics C144 | Genomic Technology | |
| Human Genetics M207A | Theoretical Genetic Modeling (same as Biomath 207A, Biostats M272) (really rigorous, elegant complement to BI, for the strong at heart only) | |
| Human Genetics M207B | Applied Genetic Modeling (same as Biomath 207B, Biostats M237) (more applied, less rigorous, but still substantive. Requires Biostats 110A/B) |
(B) BI Computer Science
| Math 157 | Software Techniques for Scientific Computing | |
| PC 110 | Parallel and Distinguished Computing (5 units) | |
| CS 130 | Software Engineering | |
| CS 143 | Introduction to Data Base Systems | |
| CS 170A | Mathematical Modeling & Methods for Computer Science | |
| CS 171L | Data Communications Lab (2-4 units) | |
| CS 180 | Introduction to Algorithms and Complexity | |
| CS 181 | Introduction to Formal Languages & Automata Theory | |
| CS CM186C/CM286C | Biomedical Systems/Biocybernetics Research Lab | |
| CS M296A | Modeling Methodology in Biological Systems |
(C) BI Molecular & Cellular Biochemistry
| MCDB 100 | Introduction to Cell Biology | |
| MCDB 156 | Human Genetics | |
| MIMG 101 | Introductory Microbiology | |
| MIMG 101L | Introductory Microbiology Lab | |
| MIMG 106 | Molecular and Genetic Basis of Bacterial Infections | |
| MIMG 168 | Molecular Parasitology (good biological systems analysis course) | |
| MIMG 185A | Immunology | |
| Chemistry 110A | Physical Chemistry: Chemical Thermodynamics | |
| Chemistry 110B | Physical Chemistry: Intro to Statistical Mechanics & Kinetics | |
| Chemistry 125 | Computers in Chemistry | |
| Chemistry 153A | Biochemistry: Intro to Structure, Enzymes & Metabolism | |
| Chemistry 153B | Biochemistry: DNA, RNA and Protein Synthesis | |
| Chemistry 153G | Macromolecular Structure | |
| Chemistry 156 | Physical Biochemistry | |
| Chemistry CM160A/CM260A* | Introduction to Bioinformatics (NEW Pre-Requisite: PIC60 or CS 180) | A must! |
| Chemistry C160B/C260B | Algorithms in Bioinformatics and Systems Biology | |
| Biological Chemistry CM169 | Cell Structure, Signaling and Differentiation (Same as Human Genetics and MCDB CM169) | |
| Biological Chemistry CM178 | Molecular Genetics (Same as Human Genetics and MCDB CM178) |
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