Software Developed by our Group
- EMMA Efficient Mixed-Model Association
- WHAP Weighted HAPlotype association webserver for performing associations at ungenotyped SNPs.
- MPAD Mouse Phenotype Association Database genome browser for performing whole genome association in inbred mouse strains.
- HAP Haplotype Resolution using Imperfect Phylogeny to recover haplotypes from genotype data. Resolve genotypes using our webserver.
- MITRA MIsmatch TRee Aproach to discovering regulatory elements in DNA sequences. Find Motifs using MITRA on our webserver.
- Sparse Markov Transducers Homepage of Sparse Markov Transducers (SMTs). Sequence Modeling Software implementing SMT algorithm available under GPL.
